no.uio.labmed.biojava.alignment
Class AbstractAligner

java.lang.Object
  |
  +--no.uio.labmed.biojava.alignment.AbstractAligner
All Implemented Interfaces:
AlignerInterface
Direct Known Subclasses:
SimpleAligner

public abstract class AbstractAligner
extends java.lang.Object
implements AlignerInterface

Abstract implementation of the AlignerInterface.


Constructor Summary
AbstractAligner()
           
 
Method Summary
abstract  float align(org.biojava.bio.symbol.SymbolList a, org.biojava.bio.symbol.SymbolList b)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

AbstractAligner

public AbstractAligner()
Method Detail

align

public abstract float align(org.biojava.bio.symbol.SymbolList a,
                            org.biojava.bio.symbol.SymbolList b)
Specified by:
align in interface AlignerInterface