no.uio.labmed.biojava.alignment
Class ScoreIdentity

java.lang.Object
  |
  +--no.uio.labmed.biojava.alignment.ScoreIdentity
All Implemented Interfaces:
ScoreInterface

public class ScoreIdentity
extends java.lang.Object
implements ScoreInterface

Implementation of ScoreInterface which scores identity.


Field Summary
 float MATCH_SCORE
           
 float NONMATCH_SCORE
           
 float NULL_SCORE
           
 
Constructor Summary
ScoreIdentity()
           
 
Method Summary
 float getScore(java.lang.Object x, java.lang.Object y)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

NULL_SCORE

public float NULL_SCORE

MATCH_SCORE

public float MATCH_SCORE

NONMATCH_SCORE

public float NONMATCH_SCORE
Constructor Detail

ScoreIdentity

public ScoreIdentity()
Method Detail

getScore

public float getScore(java.lang.Object x,
                      java.lang.Object y)
Specified by:
getScore in interface ScoreInterface