no.uio.labmed.molecule
Class AminoAcidElement

java.lang.Object
  |
  +--no.uio.labmed.molecule.MolecularElement
        |
        +--no.uio.labmed.molecule.CompoundElement
              |
              +--no.uio.labmed.molecule.AminoAcidElement

public class AminoAcidElement
extends CompoundElement

Defines the amino acid molecular structures.


Nested Class Summary
 
Nested classes inherited from class no.uio.labmed.molecule.CompoundElement
CompoundElement.SubElement
 
Constructor Summary
AminoAcidElement(java.lang.String name)
           
AminoAcidElement(java.lang.String name, MolecularType type)
           
AminoAcidElement(java.lang.String name, MolecularType type, java.lang.String desc)
           
AminoAcidElement(java.lang.String name, java.lang.String desc)
           
 
Method Summary
static MolecularElement get(java.lang.String name)
           
 MolecularElement map()
           
 
Methods inherited from class no.uio.labmed.molecule.CompoundElement
addElement, addElement, addElementAndTags, getElement, getElement, getFinalElement, getNew, getSubElement, isAtom, keyIterator, size, subsize, thissize
 
Methods inherited from class no.uio.labmed.molecule.MolecularElement
getDescription, getName, getType, toString
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 

Constructor Detail

AminoAcidElement

public AminoAcidElement(java.lang.String name)

AminoAcidElement

public AminoAcidElement(java.lang.String name,
                        MolecularType type)

AminoAcidElement

public AminoAcidElement(java.lang.String name,
                        MolecularType type,
                        java.lang.String desc)

AminoAcidElement

public AminoAcidElement(java.lang.String name,
                        java.lang.String desc)
Method Detail

map

public MolecularElement map()
Overrides:
map in class MolecularElement

get

public static MolecularElement get(java.lang.String name)