no.uio.labmed.molecule
Class SimpleCompoundElement

java.lang.Object
  |
  +--no.uio.labmed.molecule.MolecularElement
        |
        +--no.uio.labmed.molecule.CompoundElement
              |
              +--no.uio.labmed.molecule.SimpleCompoundElement

public class SimpleCompoundElement

extends CompoundElement

Definitions of simple molecules that tend to be components of larger compounds: eg. CHx, NHx, OH.

Unlike elements defined in SimpleElement, which are complete molecules, these constitute frequently used subcomponents of other molecules.

Nested Class Summary

Nested classes inherited from class no.uio.labmed.molecule.CompoundElement

CompoundElement.SubElement

Constructor Summary

SimpleCompoundElement(java.lang.String name)

SimpleCompoundElement(java.lang.String name, java.lang.String desc)

Method Summary

static MolecularElement	get(java.lang.String name)
MolecularElement	map()

Methods inherited from class no.uio.labmed.molecule.CompoundElement

addElement, addElement, addElementAndTags, getElement, getElement, getFinalElement, getNew, getSubElement, isAtom, keyIterator, size, subsize, thissize

Methods inherited from class no.uio.labmed.molecule.MolecularElement

getDescription, getName, getType, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

SimpleCompoundElement

public SimpleCompoundElement(java.lang.String name)

SimpleCompoundElement

public SimpleCompoundElement(java.lang.String name,
                             java.lang.String desc)

Method Detail

map

public MolecularElement map()

Overrides:

map in class MolecularElement

get

public static MolecularElement get(java.lang.String name)